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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943019.1_cds_XP_016486319.1_77168
CDS Infomation

[gene=LOC107806638] [db_xref=GeneID:107806638] [protein=auxin response factor 9-like isoform X2] [protein_id=XP_016486319.1] [location=join(28836..28890,28980..29089,29506..29601,29849..29908,29998..30150,30243..30327,30406..30496,30832..30993,31122..31235,31346..31418,31494..31647,31739..32277,32384..32571,32699..32780)] [gbkey=CDS]
Sequence

ATGGAGAATAATGGGTGTTATCAGTCTCAACAGCAGACCAATTTTTCAGCTAAAGGTAAA
GATGATCTGTACCATGAGTTATGGAAGTTGTGTGCAGGTCCATTAGTTGATGTACCAAAA
GATGGAGAAAGAGTTTACTATTTTCCACAAGGTCACATGGAGCAATTGGAAGCATCAATG
AATCAGGAATTGAATCTGAGAATTCCATCATTCAATCTTCAACCAAAGATCCTCTGTCGT
GTTATTCACACTCAGCTCCTGGCTGAGCAAGATACTGATGAGGTCTATGCTCAAATTACT
TTGATGCCCGAAGCAGCCGAACAAGCCGAGCCGACTAGTCAAGATCCATGCCTTCCCGAG
CCTCAGAGGCCAAAAGTTCATTCCTTTTGCAAAGTTTTGACTGCATCGGATACGAGCACT
CATGGCGGATTTTCTGTTCTTAGGAAACATGCTAATGAATGTCTTCCATCCCTGGACATG
AACCAGCAGACTCCGACACAGGAATTGATCGCTAAAGACCTTCATGGCACCGAGTGGCAC
TTTAAACATATATTTAGAGGCCAACCTCGGAGACATTTACTTACCACAGGGTGGAGTACC
TTTGTTTCTTCAAAGCGATTAGTTGCTGGGGATTCTTTTGTATTCTTGAGGGGTGAGAAT
GGAGAACTACGGGTTGGTGTTAGACGGCTTGCTCGCCAACAGAGCTCGATGCCATCATCA
GTGATATCAAGTCAGAGCATGCACCTAGGAGTCCTAGCTACAGCATCTCATGCTGTTACA
ACCCAGACCTTGTTTGTTTACTACAAGCCGATAACCAGTCAGTTTATCATAGGCCTCAAC
AAATACTTAGAGACTGTTAAGCATGGATATTCAGTTGGCATGCGATTTAAGATGCAGTTT
GAAGGAGAAGAGAGTCCTGAGAGAAGATTTACAGGCACTATAGTTGGGATTGAAGATCTT
TCCTCACAGTGGAAAGATTCTACATGGCGATCATTGAAGGTTCAATGGGACGAGCCGGCA
TCCATTTCACGGCCCGACAGAGTTTCTCCTTGGGAAATAGAACCTTTTGTGGCTTCCGTT
CCAAATCCACTTGTCCCGCCAATGGCAGGGAAGAATAAAAGGCATCGACCACATATTGAA
ACGAAAATTTCAGAACCTGCATCCTCAGTTGCATCAGCGGTTTGGAATCCTTCCATTGAC
TCGCCTCAATTTAACACCACTGGCATTAACAGCAGTACGCTAACATCTCATACAGACAGT
GGTTGTGGTTGGCGGCTTCCTCATTTAAATGCTTCTTCAAGTATGCTTGTGGATGAGACA
GAAGACAGTAAAAGTGCTTCAGCTTGGTCTGGTTATCCAAGCGTTTTGTCCTCGCAATTC
AGTAAAGGGACTAATCAGCCGATTCTTAGTCCTACTGATGAAAGAAAATGTGAAACCATC
ACAACCTGTAGATTATTTGGTATTGACTTGAAAAGTACCTTAATCAGCACTGCTGAAGCA
CCACTGCCAAAACCAGCGAACATTTCTAATGTCTCCACCGAGAGAGCATCTCCAAACACA
GTGCCTGCTGGTGATTCAGATCAAAACTCCGATCTTTCAATTGATTTCAAAGATCAAAAG
CAAGGCCAGTTGCAGTTACTCCTAAAAGAGGTTCAAAGCAAGCAGAATTGTTCCACCCGG
AGTCGCACCAAGGTTCAAATGCAAGGGGTAGCTGTGGGTCGTGCAGTGGATTTAACCGCA
CTGAAAGGATATAATGAGCTTATAAAGGAACTCGAGGAGATGTTTGAAATCCAAGGAGAG
CTTCATCCACGAAATAAATGGGAGATCGTGTTTACAGATGACGAAGGAGATATGATGCTT
ATGGGTGATCATCCATGGCTTGAGGAGGATTTTCATTGTTTCCAGTCAAGATATCAAAAA
ATGGAGTGCAGGAAACAAACTTCTATCGTGTGCAGACAATGA

Peptide Sequence

PEP ID

XP_016486319.1
PEP Infomation

PREDICTED: auxin response factor 9-like isoform X2 [Nicotiana tabacum]
Sequence

MENNGCYQSQQQTNFSAKGKDDLYHELWKLCAGPLVDVPKDGERVYYFPQGHMEQLEASM
NQELNLRIPSFNLQPKILCRVIHTQLLAEQDTDEVYAQITLMPEAAEQAEPTSQDPCLPE
PQRPKVHSFCKVLTASDTSTHGGFSVLRKHANECLPSLDMNQQTPTQELIAKDLHGTEWH
FKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSS
VISSQSMHLGVLATASHAVTTQTLFVYYKPITSQFIIGLNKYLETVKHGYSVGMRFKMQF
EGEESPERRFTGTIVGIEDLSSQWKDSTWRSLKVQWDEPASISRPDRVSPWEIEPFVASV
PNPLVPPMAGKNKRHRPHIETKISEPASSVASAVWNPSIDSPQFNTTGINSSTLTSHTDS
GCGWRLPHLNASSSMLVDETEDSKSASAWSGYPSVLSSQFSKGTNQPILSPTDERKCETI
TTCRLFGIDLKSTLISTAEAPLPKPANISNVSTERASPNTVPAGDSDQNSDLSIDFKDQK
QGQLQLLLKEVQSKQNCSTRSRTKVQMQGVAVGRAVDLTALKGYNELIKELEEMFEIQGE
LHPRNKWEIVFTDDEGDMMLMGDHPWLEEDFHCFQSRYQKMECRKQTSIVCRQ

Transcript Sequence

Gene sequence data has not been registered.